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elxDeformationFieldTransform.h
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1 /*=========================================================================
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3  * Copyright UMC Utrecht and contributors
4  *
5  * Licensed under the Apache License, Version 2.0 (the "License");
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12  * distributed under the License is distributed on an "AS IS" BASIS,
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14  * See the License for the specific language governing permissions and
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17  *=========================================================================*/
18 #ifndef __elxDeformationFieldTransform_H__
19 #define __elxDeformationFieldTransform_H__
20 
21 #include "elxIncludes.h" // include first to avoid MSVS warning
24 
25 namespace elastix
26 {
27 
53 template< class TElastix >
55  public
57  typename elx::TransformBase< TElastix >::CoordRepType,
58  elx::TransformBase< TElastix >::FixedImageDimension >,
59  public
60  TransformBase< TElastix >
61 {
62 public:
63 
66 
73 
77 
79 
80  typedef itk::SmartPointer< Self > Pointer;
81  typedef itk::SmartPointer< const Self > ConstPointer;
82 
84  itkNewMacro( Self );
85 
88 
93  elxClassNameMacro( "DeformationFieldTransform" );
94 
96  itkStaticConstMacro( SpaceDimension, unsigned int, Superclass2::FixedImageDimension );
97 
111 
115 
118 
131 
133  virtual void ReadFromFile( void );
134 
136  virtual void WriteToFile( const ParametersType & param ) const;
137 
138 protected:
139 
144 
145 private:
146 
148  DeformationFieldTransform( const Self & ); // purposely not implemented
150  void operator=( const Self & ); // purposely not implemented
151 
152  typedef typename DeformationFieldType::DirectionType DirectionType;
153 
157 
160 
161 };
162 
163 } // end namespace elastix
164 
165 #ifndef ITK_MANUAL_INSTANTIATION
166 #include "elxDeformationFieldTransform.hxx"
167 #endif
168 
169 #endif // end #ifndef __elxDeformationFieldTransform_H__
itk::AdvancedCombinationTransform::JacobianType
Superclass::JacobianType JacobianType
Definition: itkAdvancedCombinationTransform.h:84
itk::DeformationFieldInterpolatingTransform::DeformationFieldVectorType
Vector< DeformationFieldComponentType, itkGetStaticConstMacro(OutputSpaceDimension) > DeformationFieldVectorType
Definition: itkDeformationFieldInterpolatingTransform.h:91
elastix::DeformationFieldTransform::DeformationFieldType
DeformationFieldInterpolatingTransformType::DeformationFieldType DeformationFieldType
Definition: elxDeformationFieldTransform.h:113
elastix::DeformationFieldTransform::Self
DeformationFieldTransform Self
Definition: elxDeformationFieldTransform.h:65
itk::AdvancedCombinationTransform::OutputCovariantVectorType
Superclass::OutputCovariantVectorType OutputCovariantVectorType
Definition: itkAdvancedCombinationTransform.h:88
elastix::DeformationFieldTransform::FixedImageType
Superclass2::FixedImageType FixedImageType
Definition: elxDeformationFieldTransform.h:127
elastix::TransformBase::FixedImageType
ElastixType::FixedImageType FixedImageType
Definition: elxTransformBase.h:157
SmartPointer< Self >
elastix::DeformationFieldTransform::ConfigurationPointer
Superclass2::ConfigurationPointer ConfigurationPointer
Definition: elxDeformationFieldTransform.h:123
elastix::TransformBase::CoordRepType
ElastixType::CoordRepType CoordRepType
Definition: elxTransformBase.h:156
elastix::DeformationFieldTransform::InputPointType
Superclass1::InputPointType InputPointType
Definition: elxDeformationFieldTransform.h:109
elastix::TransformBase::RegistrationPointer
Superclass::RegistrationPointer RegistrationPointer
Definition: elxTransformBase.h:153
elastix::DeformationFieldTransform::OutputVnlVectorType
Superclass1::OutputVnlVectorType OutputVnlVectorType
Definition: elxDeformationFieldTransform.h:108
elastix::DeformationFieldTransform::m_OriginalDeformationFieldDirection
DirectionType m_OriginalDeformationFieldDirection
Definition: elxDeformationFieldTransform.h:159
itkAdvancedCombinationTransform.h
elastix::DeformationFieldTransform::Superclass1
itk::AdvancedCombinationTransform< typename elx::TransformBase< TElastix >::CoordRepType, elx::TransformBase< TElastix >::FixedImageDimension > Superclass1
Definition: elxDeformationFieldTransform.h:76
elastix::DeformationFieldTransform::RegistrationType
Superclass2::RegistrationType RegistrationType
Definition: elxDeformationFieldTransform.h:124
elastix::DeformationFieldTransform::InputCovariantVectorType
Superclass1::InputCovariantVectorType InputCovariantVectorType
Definition: elxDeformationFieldTransform.h:105
itk::DeformationFieldInterpolatingTransform
Transform that interpolates a given deformation field.
Definition: itkDeformationFieldInterpolatingTransform.h:49
elastix::DeformationFieldTransform::elxClassNameMacro
elxClassNameMacro("DeformationFieldTransform")
elastix::DeformationFieldTransform::RegistrationPointer
Superclass2::RegistrationPointer RegistrationPointer
Definition: elxDeformationFieldTransform.h:125
itk::AdvancedCombinationTransform::OutputVectorType
Superclass::OutputVectorType OutputVectorType
Definition: itkAdvancedCombinationTransform.h:86
elastix::DeformationFieldTransform::MovingImageType
Superclass2::MovingImageType MovingImageType
Definition: elxDeformationFieldTransform.h:128
itk::AdvancedCombinationTransform::ParametersType
Superclass::ParametersType ParametersType
Definition: itkAdvancedCombinationTransform.h:79
itk::AdvancedCombinationTransform
This class combines two transforms: an 'initial transform' with a 'current transform'.
Definition: itkAdvancedCombinationTransform.h:58
elastix::DeformationFieldTransform::Pointer
itk::SmartPointer< Self > Pointer
Definition: elxDeformationFieldTransform.h:80
elastix::TransformBase::MovingImageType
ElastixType::MovingImageType MovingImageType
Definition: elxTransformBase.h:158
itk::AdvancedCombinationTransform::ScalarType
Superclass::ScalarType ScalarType
Definition: itkAdvancedCombinationTransform.h:78
elastix::DeformationFieldTransform::InputVnlVectorType
Superclass1::InputVnlVectorType InputVnlVectorType
Definition: elxDeformationFieldTransform.h:107
elastix::TransformBase::ElastixType
Superclass::ElastixType ElastixType
Definition: elxTransformBase.h:141
elastix::DeformationFieldTransform::JacobianType
Superclass1::JacobianType JacobianType
Definition: elxDeformationFieldTransform.h:102
elastix::DeformationFieldTransform::OutputCovariantVectorType
Superclass1::OutputCovariantVectorType OutputCovariantVectorType
Definition: elxDeformationFieldTransform.h:106
itk::AdvancedCombinationTransform::OutputPointType
Superclass::OutputPointType OutputPointType
Definition: itkAdvancedCombinationTransform.h:92
elastix::DeformationFieldTransform::DeformationFieldInterpolatingTransformPointer
DeformationFieldInterpolatingTransformType::Pointer DeformationFieldInterpolatingTransformPointer
Definition: elxDeformationFieldTransform.h:117
itk::DeformationFieldInterpolatingTransform::DeformationFieldType
Image< DeformationFieldVectorType, itkGetStaticConstMacro(InputSpaceDimension) > DeformationFieldType
Definition: itkDeformationFieldInterpolatingTransform.h:93
elastix::DeformationFieldTransform
A transform based on a DeformationField.
Definition: elxDeformationFieldTransform.h:61
elastix::DeformationFieldTransform::NumberOfParametersType
Superclass1::NumberOfParametersType NumberOfParametersType
Definition: elxDeformationFieldTransform.h:101
elastix::DeformationFieldTransform::ElastixType
Superclass2::ElastixType ElastixType
Definition: elxDeformationFieldTransform.h:120
itk::AdvancedTransform
Transform maps points, vectors and covariant vectors from an input space to an output space.
Definition: itkAdvancedTransform.h:87
elastix::DeformationFieldTransform::ITKBaseType
Superclass2::ITKBaseType ITKBaseType
Definition: elxDeformationFieldTransform.h:129
elastix::TransformBase::ElastixPointer
Superclass::ElastixPointer ElastixPointer
Definition: elxTransformBase.h:145
itk::AdvancedCombinationTransform::OutputVnlVectorType
Superclass::OutputVnlVectorType OutputVnlVectorType
Definition: itkAdvancedCombinationTransform.h:90
itk::AdvancedCombinationTransform::InputVectorType
Superclass::InputVectorType InputVectorType
Definition: itkAdvancedCombinationTransform.h:85
elastix::DeformationFieldTransform::m_DeformationFieldInterpolatingTransform
DeformationFieldInterpolatingTransformPointer m_DeformationFieldInterpolatingTransform
Definition: elxDeformationFieldTransform.h:156
elastix::DeformationFieldTransform::ScalarType
Superclass1::ScalarType ScalarType
Definition: elxDeformationFieldTransform.h:99
elastix::DeformationFieldTransform::CoordRepType
Superclass2::CoordRepType CoordRepType
Definition: elxDeformationFieldTransform.h:126
elastix::DeformationFieldTransform::ElastixPointer
Superclass2::ElastixPointer ElastixPointer
Definition: elxDeformationFieldTransform.h:121
elastix::DeformationFieldTransform::DeformationFieldTransform
DeformationFieldTransform()
elastix::DeformationFieldTransform::DeformationFieldVectorType
DeformationFieldInterpolatingTransformType::DeformationFieldVectorType DeformationFieldVectorType
Definition: elxDeformationFieldTransform.h:114
elastix::DeformationFieldTransform::Superclass2
elx::TransformBase< TElastix > Superclass2
Definition: elxDeformationFieldTransform.h:78
elxIncludes.h
elastix::DeformationFieldTransform::ReadFromFile
virtual void ReadFromFile(void)
elastix::DeformationFieldTransform::operator=
void operator=(const Self &)
itk::AdvancedCombinationTransform::InputVnlVectorType
Superclass::InputVnlVectorType InputVnlVectorType
Definition: itkAdvancedCombinationTransform.h:89
elastix::DeformationFieldTransform::ConfigurationType
Superclass2::ConfigurationType ConfigurationType
Definition: elxDeformationFieldTransform.h:122
itk::AdvancedCombinationTransform::NumberOfParametersType
Superclass::NumberOfParametersType NumberOfParametersType
Definition: itkAdvancedCombinationTransform.h:82
elastix::DeformationFieldTransform::ConstPointer
itk::SmartPointer< const Self > ConstPointer
Definition: elxDeformationFieldTransform.h:81
elastix::DeformationFieldTransform::~DeformationFieldTransform
virtual ~DeformationFieldTransform()
Definition: elxDeformationFieldTransform.h:143
elastix::DeformationFieldTransform::DeformationFieldInterpolatingTransformType
itk::DeformationFieldInterpolatingTransform< typename elx::TransformBase< TElastix >::CoordRepType, elx::TransformBase< TElastix >::FixedImageDimension, float > DeformationFieldInterpolatingTransformType
Definition: elxDeformationFieldTransform.h:72
elastix::DeformationFieldTransform::WriteToFile
virtual void WriteToFile(const ParametersType &param) const
elastix::DeformationFieldTransform::itkStaticConstMacro
itkStaticConstMacro(SpaceDimension, unsigned int, Superclass2::FixedImageDimension)
elastix::DeformationFieldTransform::DirectionType
DeformationFieldType::DirectionType DirectionType
Definition: elxDeformationFieldTransform.h:152
elastix::DeformationFieldTransform::DeformationFieldTransform
DeformationFieldTransform(const Self &)
itk::AdvancedCombinationTransform::InputPointType
Superclass::InputPointType InputPointType
Definition: itkAdvancedCombinationTransform.h:91
elastix::DeformationFieldTransform::InputVectorType
Superclass1::InputVectorType InputVectorType
Definition: elxDeformationFieldTransform.h:103
elastix::DeformationFieldTransform::OutputPointType
Superclass1::OutputPointType OutputPointType
Definition: elxDeformationFieldTransform.h:110
elastix::DeformationFieldTransform::ParametersType
Superclass1::ParametersType ParametersType
Definition: elxDeformationFieldTransform.h:100
elastix::TransformBase::ConfigurationType
Superclass::ConfigurationType ConfigurationType
Definition: elxTransformBase.h:146
itk::AdvancedCombinationTransform::InputCovariantVectorType
Superclass::InputCovariantVectorType InputCovariantVectorType
Definition: itkAdvancedCombinationTransform.h:87
elastix::DeformationFieldTransform::CombinationTransformType
Superclass2::CombinationTransformType CombinationTransformType
Definition: elxDeformationFieldTransform.h:130
elastix::TransformBase::ConfigurationPointer
Superclass::ConfigurationPointer ConfigurationPointer
Definition: elxTransformBase.h:147
elastix::TransformBase
This class is the elastix base class for all Transforms.
Definition: elxTransformBase.h:133
itkDeformationFieldInterpolatingTransform.h
elastix
Definition: elxFixedGenericPyramid.h:25
elastix::DeformationFieldTransform::OutputVectorType
Superclass1::OutputVectorType OutputVectorType
Definition: elxDeformationFieldTransform.h:104
elastix::TransformBase::RegistrationType
Superclass::RegistrationType RegistrationType
Definition: elxTransformBase.h:152


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