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itkCyclicBSplineDeformableTransform.h
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1 /*=========================================================================
2  *
3  * Copyright UMC Utrecht and contributors
4  *
5  * Licensed under the Apache License, Version 2.0 (the "License");
6  * you may not use this file except in compliance with the License.
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10  *
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14  * See the License for the specific language governing permissions and
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16  *
17  *=========================================================================*/
18 #ifndef __itkCyclicBSplineDeformableTransform_h
19 #define __itkCyclicBSplineDeformableTransform_h
20 
21 #include "itkAdvancedTransform.h"
22 #include "itkImage.h"
23 #include "itkImageRegion.h"
29 
30 namespace itk
31 {
32 
40 template<
41 class TScalarType = double, // Data type for scalars
42 unsigned int NDimensions = 3, // Number of dimensions
43 unsigned int VSplineOrder = 3 >
44 // Spline order
46  public AdvancedBSplineDeformableTransform< TScalarType, NDimensions, VSplineOrder >
47 {
48 public:
49 
53  TScalarType, NDimensions, VSplineOrder > Superclass;
55  typedef SmartPointer< const Self > ConstPointer;
56 
58  itkNewMacro( Self );
59 
62 
64  itkStaticConstMacro( SpaceDimension, unsigned int, NDimensions );
65 
67  itkStaticConstMacro( SplineOrder, unsigned int, VSplineOrder );
68 
71  typedef typename Superclass
73  typedef typename Superclass
76  typedef typename Superclass
81 
83  typedef typename ParametersType::ValueType PixelType;
84  typedef Image< PixelType,
85  itkGetStaticConstMacro( SpaceDimension ) > ImageType;
86  typedef typename ImageType::Pointer ImagePointer;
87 
89  typedef typename RegionType::IndexType IndexType;
90  typedef typename RegionType::SizeType SizeType;
91  typedef typename ImageType::SpacingType SpacingType;
92  typedef typename ImageType::DirectionType DirectionType;
93  typedef typename ImageType::PointType OriginType;
94  typedef typename RegionType::IndexType GridOffsetType;
98  typedef typename Superclass::
99  ParameterIndexArrayType ParameterIndexArrayType;
100  typedef typename Superclass::
101  ContinuousIndexType ContinuousIndexType;
103  typedef typename Superclass::
104  JacobianImageType JacobianImageType;
105  typedef typename Superclass::
106  JacobianPixelType JacobianPixelType;
107  typedef typename Superclass::
108  WeightsFunctionType WeightsFunctionType;
110  itkGetStaticConstMacro( SpaceDimension ) - 1,
111  itkGetStaticConstMacro( SplineOrder ) > RedWeightsFunctionType;
112  typedef typename RedWeightsFunctionType::
113  ContinuousIndexType RedContinuousIndexType;
114 
116  virtual void SetGridRegion( const RegionType & region );
117 
125  virtual void TransformPoint(
126  const InputPointType & inputPoint,
127  OutputPointType & outputPoint,
128  WeightsType & weights,
129  ParameterIndexArrayType & indices,
130  bool & inside ) const;
131 
133  virtual void GetJacobian(
134  const InputPointType & ipp,
135  WeightsType & weights,
136  ParameterIndexArrayType & indices ) const;
137 
139  virtual void GetSpatialJacobian(
140  const InputPointType & ipp,
141  SpatialJacobianType & sj ) const;
142 
143 protected:
144 
147 
149  NonZeroJacobianIndicesType & nonZeroJacobianIndices,
150  const RegionType & supportRegion ) const;
151 
153  bool InsideValidRegion( const ContinuousIndexType & index ) const;
154 
156  virtual void SplitRegion(
157  const RegionType & imageRegion,
158  const RegionType & inRegion,
159  RegionType & outRegion1,
160  RegionType & outRegion2 ) const;
161 
162 private:
163 
164  CyclicBSplineDeformableTransform( const Self & ); // purposely not implemented
165  void operator=( const Self & ); // purposely not implemented
166 
167 };
168 
169 } // namespace itk
170 
171 #ifndef ITK_MANUAL_INSTANTIATION
172 #include "itkCyclicBSplineDeformableTransform.hxx"
173 #endif
174 
175 #endif /* __itkCyclicBSplineDeformableTransform_h */
itk::CyclicBSplineDeformableTransform::WeightsType
Superclass::WeightsType WeightsType
Definition: itkCyclicBSplineDeformableTransform.h:97
itk::CyclicBSplineDeformableTransform::CyclicBSplineDeformableTransform
CyclicBSplineDeformableTransform(const Self &)
itk::CyclicBSplineDeformableTransform::SpatialJacobianType
Superclass::SpatialJacobianType SpatialJacobianType
Definition: itkCyclicBSplineDeformableTransform.h:70
itk::AdvancedBSplineDeformableTransform::InputPointType
Superclass::InputPointType InputPointType
Definition: itkAdvancedBSplineDeformableTransform.h:164
itk::CyclicBSplineDeformableTransform::itkStaticConstMacro
itkStaticConstMacro(SplineOrder, unsigned int, VSplineOrder)
itk::CyclicBSplineDeformableTransform::ParameterIndexArrayType
Superclass::ParameterIndexArrayType ParameterIndexArrayType
Definition: itkCyclicBSplineDeformableTransform.h:99
itk::CyclicBSplineDeformableTransform::SpatialHessianType
Superclass::SpatialHessianType SpatialHessianType
Definition: itkCyclicBSplineDeformableTransform.h:75
itkCyclicBSplineDeformableTransform.h
itk::CyclicBSplineDeformableTransform::OutputPointType
Superclass::OutputPointType OutputPointType
Definition: itkCyclicBSplineDeformableTransform.h:96
itk::AdvancedBSplineDeformableTransform::OutputPointType
Superclass::OutputPointType OutputPointType
Definition: itkAdvancedBSplineDeformableTransform.h:165
itkAdvancedTransform.h
itk::CyclicBSplineDeformableTransform::JacobianImageType
Superclass::JacobianImageType JacobianImageType
Definition: itkCyclicBSplineDeformableTransform.h:104
itk::CyclicBSplineDeformableTransform::Self
CyclicBSplineDeformableTransform Self
Definition: itkCyclicBSplineDeformableTransform.h:51
itk::CyclicBSplineDeformableTransform::SplitRegion
virtual void SplitRegion(const RegionType &imageRegion, const RegionType &inRegion, RegionType &outRegion1, RegionType &outRegion2) const
itk::CyclicBSplineDeformableTransform::itkStaticConstMacro
itkStaticConstMacro(SpaceDimension, unsigned int, NDimensions)
SmartPointer< Self >
itk::CyclicBSplineDeformableTransform::GetJacobian
virtual void GetJacobian(const InputPointType &ipp, WeightsType &weights, ParameterIndexArrayType &indices) const
itk::AdvancedBSplineDeformableTransform::SpatialJacobianType
Superclass::SpatialJacobianType SpatialJacobianType
Definition: itkAdvancedBSplineDeformableTransform.h:177
itk::CyclicBSplineDeformableTransform::GetSpatialJacobian
virtual void GetSpatialJacobian(const InputPointType &ipp, SpatialJacobianType &sj) const
itk::CyclicBSplineDeformableTransform::JacobianOfSpatialHessianType
Superclass ::JacobianOfSpatialHessianType JacobianOfSpatialHessianType
Definition: itkCyclicBSplineDeformableTransform.h:77
itk::CyclicBSplineDeformableTransform::IndexType
RegionType::IndexType IndexType
Definition: itkCyclicBSplineDeformableTransform.h:89
itk::CyclicBSplineDeformableTransform
Deformable transform using a B-spline representation in which the B-spline grid is formulated in a cy...
Definition: itkCyclicBSplineDeformableTransform.h:47
itk::CyclicBSplineDeformableTransform::RegionType
Superclass::RegionType RegionType
Definition: itkCyclicBSplineDeformableTransform.h:88
itk::CyclicBSplineDeformableTransform::Pointer
SmartPointer< Self > Pointer
Definition: itkCyclicBSplineDeformableTransform.h:54
itk::CyclicBSplineDeformableTransform::JacobianType
Superclass::JacobianType JacobianType
Definition: itkCyclicBSplineDeformableTransform.h:69
itk::CyclicBSplineDeformableTransform::DirectionType
ImageType::DirectionType DirectionType
Definition: itkCyclicBSplineDeformableTransform.h:92
itk::AdvancedBSplineDeformableTransform
Deformable transform using a B-spline representation.
Definition: itkAdvancedBSplineDeformableTransform.h:135
itk::CyclicBSplineDeformableTransform::ParametersType
Superclass::ParametersType ParametersType
Definition: itkCyclicBSplineDeformableTransform.h:79
Image
itk::CyclicBSplineDeformableTransform::WeightsFunctionType
Superclass::WeightsFunctionType WeightsFunctionType
Definition: itkCyclicBSplineDeformableTransform.h:108
itkBSplineInterpolationWeightFunction2.h
ImageRegion< itkGetStaticConstMacro(SpaceDimension) >
itk::CyclicBSplineDeformableTransform::SpacingType
ImageType::SpacingType SpacingType
Definition: itkCyclicBSplineDeformableTransform.h:91
itk::CyclicBSplineDeformableTransform::RedContinuousIndexType
RedWeightsFunctionType::ContinuousIndexType RedContinuousIndexType
Definition: itkCyclicBSplineDeformableTransform.h:113
itk::CyclicBSplineDeformableTransform::TransformPoint
virtual void TransformPoint(const InputPointType &inputPoint, OutputPointType &outputPoint, WeightsType &weights, ParameterIndexArrayType &indices, bool &inside) const
itk::CyclicBSplineDeformableTransform::Superclass
AdvancedBSplineDeformableTransform< TScalarType, NDimensions, VSplineOrder > Superclass
Definition: itkCyclicBSplineDeformableTransform.h:53
itk::CyclicBSplineDeformableTransform::CyclicBSplineDeformableTransform
CyclicBSplineDeformableTransform()
itkBSplineInterpolationDerivativeWeightFunction.h
itkBSplineInterpolationSecondOrderDerivativeWeightFunction.h
itk::CyclicBSplineDeformableTransform::JacobianOfSpatialJacobianType
Superclass ::JacobianOfSpatialJacobianType JacobianOfSpatialJacobianType
Definition: itkCyclicBSplineDeformableTransform.h:74
itk::CyclicBSplineDeformableTransform::PixelType
ParametersType::ValueType PixelType
Definition: itkCyclicBSplineDeformableTransform.h:83
itk::CyclicBSplineDeformableTransform::OriginType
ImageType::PointType OriginType
Definition: itkCyclicBSplineDeformableTransform.h:93
itk::CyclicBSplineDeformableTransform::InternalMatrixType
Superclass::InternalMatrixType InternalMatrixType
Definition: itkCyclicBSplineDeformableTransform.h:78
double
itk::CyclicBSplineDeformableTransform::JacobianPixelType
Superclass::JacobianPixelType JacobianPixelType
Definition: itkCyclicBSplineDeformableTransform.h:106
itk::CyclicBSplineDeformableTransform::ComputeNonZeroJacobianIndices
void ComputeNonZeroJacobianIndices(NonZeroJacobianIndicesType &nonZeroJacobianIndices, const RegionType &supportRegion) const
itk::CyclicBSplineDeformableTransform::~CyclicBSplineDeformableTransform
virtual ~CyclicBSplineDeformableTransform()
itk::CyclicBSplineDeformableTransform::InsideValidRegion
bool InsideValidRegion(const ContinuousIndexType &index) const
itk::CyclicBSplineDeformableTransform::NumberOfParametersType
Superclass::NumberOfParametersType NumberOfParametersType
Definition: itkCyclicBSplineDeformableTransform.h:80
itk::CyclicBSplineDeformableTransform::ImagePointer
ImageType::Pointer ImagePointer
Definition: itkCyclicBSplineDeformableTransform.h:86
itk::CyclicBSplineDeformableTransform::InputPointType
Superclass::InputPointType InputPointType
Definition: itkCyclicBSplineDeformableTransform.h:95
itk::AdvancedBSplineDeformableTransform::ScalarType
Superclass::ScalarType ScalarType
Definition: itkAdvancedBSplineDeformableTransform.h:163
itk::CyclicBSplineDeformableTransform::ConstPointer
SmartPointer< const Self > ConstPointer
Definition: itkCyclicBSplineDeformableTransform.h:55
itk::AdvancedBSplineDeformableTransform::ParametersType
Superclass::ParametersType ParametersType
Definition: itkAdvancedBSplineDeformableTransform.h:158
itk
Definition: itkAdvancedImageToImageMetric.h:40
itk::CyclicBSplineDeformableTransform::GridOffsetType
RegionType::IndexType GridOffsetType
Definition: itkCyclicBSplineDeformableTransform.h:94
itk::AdvancedBSplineDeformableTransform::NonZeroJacobianIndicesType
Superclass ::NonZeroJacobianIndicesType NonZeroJacobianIndicesType
Definition: itkAdvancedBSplineDeformableTransform.h:176
itk::BSplineInterpolationWeightFunction2
Returns the weights over the support region used for B-spline interpolation/reconstruction.
Definition: itkBSplineInterpolationWeightFunction2.h:48
itk::CyclicBSplineDeformableTransform::ImageType
Image< PixelType, itkGetStaticConstMacro(SpaceDimension) > ImageType
Definition: itkCyclicBSplineDeformableTransform.h:85
itk::CyclicBSplineDeformableTransform::SizeType
RegionType::SizeType SizeType
Definition: itkCyclicBSplineDeformableTransform.h:90
itk::CyclicBSplineDeformableTransform::NonZeroJacobianIndicesType
Superclass ::NonZeroJacobianIndicesType NonZeroJacobianIndicesType
Definition: itkCyclicBSplineDeformableTransform.h:72
itk::CyclicBSplineDeformableTransform::ScalarType
Superclass::ScalarType ScalarType
Definition: itkCyclicBSplineDeformableTransform.h:102
itk::AdvancedBSplineDeformableTransform::WeightsType
WeightsFunctionType::WeightsType WeightsType
Definition: itkAdvancedBSplineDeformableTransform.h:213
itk::CyclicBSplineDeformableTransform::SetGridRegion
virtual void SetGridRegion(const RegionType &region)
TScalarType
itk::AdvancedBSplineDeformableTransform::JacobianOfSpatialJacobianType
Superclass ::JacobianOfSpatialJacobianType JacobianOfSpatialJacobianType
Definition: itkAdvancedBSplineDeformableTransform.h:179
itk::AdvancedBSplineDeformableTransform::SpatialHessianType
Superclass::SpatialHessianType SpatialHessianType
Definition: itkAdvancedBSplineDeformableTransform.h:180
itk::CyclicBSplineDeformableTransform::ContinuousIndexType
Superclass::ContinuousIndexType ContinuousIndexType
Definition: itkCyclicBSplineDeformableTransform.h:101
itk::AdvancedBSplineDeformableTransform::NumberOfParametersType
Superclass::NumberOfParametersType NumberOfParametersType
Definition: itkAdvancedBSplineDeformableTransform.h:160
itk::CyclicBSplineDeformableTransform::operator=
void operator=(const Self &)
itk::AdvancedBSplineDeformableTransform::JacobianType
Superclass::JacobianType JacobianType
Definition: itkAdvancedBSplineDeformableTransform.h:162
itk::AdvancedBSplineDeformableTransform::JacobianOfSpatialHessianType
Superclass ::JacobianOfSpatialHessianType JacobianOfSpatialHessianType
Definition: itkAdvancedBSplineDeformableTransform.h:182
itkAdvancedBSplineDeformableTransform.h
itk::CyclicBSplineDeformableTransform::RedWeightsFunctionType
BSplineInterpolationWeightFunction2< ScalarType, itkGetStaticConstMacro(SpaceDimension) - 1, itkGetStaticConstMacro(SplineOrder) > RedWeightsFunctionType
Definition: itkCyclicBSplineDeformableTransform.h:111
itk::AdvancedBSplineDeformableTransform::InternalMatrixType
Superclass::InternalMatrixType InternalMatrixType
Definition: itkAdvancedBSplineDeformableTransform.h:183


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